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Hi there 👋

Most of my work tied to my current and last few $JOB roles isn't public, but I developed some open source R and python packages during my time as a PhD student at Stanford in the Greenleaf Lab and have contributed to a few projects on the side since.

My graduate school projects are the ones in the pinned repositories that are part of the GreenleafLab organization. During graduate school I also developed as part of an internship with Genentech the iheatmapr package for interactive heatmaps in R.

Most of my side projects are around data visualization -- I've contributed to the vegawidget ecoysystem of R packages, and created the vegabrite package, which is a port of vega-lite to R via an auto-generated api.

Alicia Schep's Projects

awesome-single-cell icon awesome-single-cell

List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

bsselectr icon bsselectr

In-progress htmlwidget for bootstrap-select

comtradr icon comtradr

Functions for Interacting with the UN Comtrade API

corp icon corp

Assets related to the operation of Fishtown Analytics.

ctr icon ctr

Collaborative modeling for recommendation. Implements variational inference for a collaborative topic models. These models recommend items to users based on item content and other users' ratings.

ggplot2 icon ggplot2

An implementation of the Grammar of Graphics in R

ggrepel icon ggrepel

:round_pushpin: Repel overlapping text labels away from each other.

implicit icon implicit

Fast Python Collaborative Filtering for Implicit Datasets

knitr icon knitr

A general-purpose tool for dynamic report generation in R

moodsr icon moodsr

MOODS: Motif Occurrence Detection Suite

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