ziyaoli Goto Github PK
Name: Ziyao Li
Type: User
Company: Peking University
Bio: PhD @ Peking University. Interested in machine learning on proteins, molecules, and graphs.
Location: Beijing, China
Name: Ziyao Li
Type: User
Company: Peking University
Bio: PhD @ Peking University. Interested in machine learning on proteins, molecules, and graphs.
Location: Beijing, China
Install alphafold on the local machine, get out of docker.
Open source code for AlphaFold.
To become an implementation of AlphaFold3 based on Uni-Fold.
Rule based semantic parser of geo880.
see readme.pdf
Making Protein folding accessible to all!
Let us control diffusion models!
A deep learning package for many-body potential energy representation and molecular dynamics
✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
FastKAN: Very Fast Implementation of Kolmogorov-Arnold Networks (KAN)
GCN-LASE: Towards Adequately Incorporating Link Attributes in Graph Convolutional Networks
Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)
Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure
A deck tracker and deck manager for Hearthstone on Windows
A regression task on Kaggle of Sberbank Russian Housing Market. Second place achieved with complicated preprocessing issues, XGBoost and stacking strategies. (Late Submission)
Code for loralib, an implementation of "LoRA: Low-Rank Adaptation of Large Language Models"
PyTorch code for the paper "Model-Based Imitation Learning for Urban Driving".
MolGAN without Mode Collapse
Continuous-time gradient flow for generative modeling and variational inference
The main task of this project is to solve the Anisotropic Poisson equation by transforming the original problem into a linear equation using discrete differential approximations. Different methods have been attempted solving the linear equation with massive size, including direct Gauss elimination and Preconditioning Conjugate Gradient (PCG) with V-Cycle preconditioner using either Symmetric Line Gauss-Seidel Iterative Method or Symmetric Point Gauss-Seidel Iterative Method as smoother. Other methods, such as ordinary Conjugate Gradient Methods are also attempted.
OmegaFold Release Code
The official implementation of the ICLR'2023 paper PiFold: Toward effective and efficient protein inverse folding.
A formal letter template of Peking University.
Peking University - Optimization Method - Gao, Li - Spring, 2018
LaTeX template for dissertations in Peking University
Code for the ProteinMPNN paper
This package contains deep learning models and related scripts for RoseTTAFold
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.