Name: Biological Informatics CoE @ Agriculture and Agri-Food Canada/Agriculture et Agroalimentaire Canada
Type: Organization
Bio: Genomics and Metagenomics focused bioinformatics analysts supporting research at Agriculture and Agri-Food Canada.
Location: 960 Carling Ave., Ottawa, Ontario, Canada
Blog: https://agriculture.canada.ca/
Biological Informatics CoE @ Agriculture and Agri-Food Canada/Agriculture et Agroalimentaire Canada's Projects
bash script for acknowledging of login messages & logging acceptance
AAFC DINA agent module implementation / Implémentation du module de Agent DINA de AAC
Archived mock json web services for seqdb Android project
Scripts for running and post-processing genome annotation tools and outputs from e.g. Maker and Interpro software.
An Ansible role for building a machine image for CloudMan.
Releases of Automated Oligo Design Pipeline (AODP): [email protected]
A repository supporting the methodology and distribution of a custom baitset used for insect target enrichment sequencing
Lightweight backup automation, logging, and organisation system with support for multiple targets
Packer templates for vagrant baseboxes
A playbook to set up a virtual cluster with a suite of bioinformatics packages.
Repository where users and developers can create and discuss issues during development
Genome assembly and metadata collection
Scripts, small datasets and other files related to using and populating BlazeGraph.
Easily launch your own cloud servers for use with Galaxy and CloudMan
Easily create compute clusters on the Cloud.
JSON API library for Java
Perl pipeline used to assemble genomes and transcriptomes and report sequencing and processing metadata in data releases.
Base DINA API package for Java built on SpringBoot and Crnk
init-container used to manage DINA databases for dev/test env
AAFC-DINA Documentation
Data Export, Report and Label module
Deployment scripts and files for local deployment of the DINA system
AAFC-DINA planning repository
Python access to the DINA API
Search module for AAFC-DINA
React based user interface for the DINA project / Interface utilisateur basée sur React pour le projet DINA
AAFC DINA User Module
dirvish backup system container based on debian:jessie