Name: Adam Caccavano
Type: User
Company: National Institutes of Health (NIH)
Bio: Postdoctoral Fellow in neuroscience, focusing on electrophysiology, micro-circuitry, calcium imaging, and computational techniques for analysis and modeling
Twitter: adam_caccavano
Adam Caccavano's Projects
An FIJI (ImageJ) macro to automate multi-channel colocalization analyses, to calculate regional intensities, pairwise Pearson's correlations, and subdivide cell counts within regions.
Set of ImageJ (FIJI) macros to import raw TIF images of time series Calcium imaging recordings, correct for photo-bleaching, identify regions of highest fluorescence change to assist in ROI placement, and calculate deltaF/F as a function of time for each ROI. Please cite Caccavano et. al. bioRxiv 2020.
Suite of MATLAB algorithms (recommended to be used with App Designer GUI) for the analysis and coincidence detection of local field sharp wave ripples (SWRs), local field oscillations (theta, gamma, etc.), spikes (SWR coincidence and spike-phase coupling), post-synaptic currents (PSCs), and calcium transients. Written in MATLAB 2022a Update 4