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ais_tmt

This script prepares, filters, and uses raw Exact Earth AIS data to calculate the fishing activity for trawlers

aisvvms

basic_popstar_shiny

Code to create a shiny with basic plots for tagging data

ecoregions

Ecoregions developed for the IOTC and ICCAT convention areas.

fisheries_atlas_indicators

iotc_ss3_shiny

These are all the files and folders necessary to run the Shiny on the VRE. The data directory is the Thredds catalog address, though there are 2 netcdf data files in the data folder if there's a problem. The data folder also contains the run_spec_ss3.csv file, which is necessary for the shiny to run.

popstar_netcdf

Codes to convert tagging data to standard NetCDF format as defined for the POPSTAR project

smtsupport

Functions and datasets created to support the FAO SDG 14.4.1 Stock Monitoring Tool.

stockmonitoringtool

water_areas_geoflow

Geoflow for publishing GRSF water areas in the GRSF SDI (OGC metadata and data services)

zenodo_doi_iotc

These scripts use the geoflow and zen4R packages to publish IOTC documents on Zenodo and obtain their DOI. The IOTC documents are first filtered according to selection criteria to remove documents that do not have scientific value for the larger community.