Comments (2)
from juicer.
Hi Neva,
Thank you for your quick reply. I have determined that the error was due to generation of incomplete input file (the process was cut off half way). Still, your reply will help shed more light on how to incorporate fragment information into the input file! Thank you.
Wilson
from juicer.
Related Issues (20)
- Clarify wiki
- Can I generate an asymmetric .hic file for an asymmetric matrix, and to illustrate the unsymmetric matrix by JuiceBox? HOT 3
- Same chromosome, same hic-data, different scaffolding results
- Is it possible to calculate interchromosomal interactions using juicer? HOT 1
- awk: fatal: cannot open file /splits/hic.fastq.gz_norm.txt' for reading (No such file or directory)
- > Unknown command: statistics
- Calculating norms for zoom BP_100000java.lang.ArrayIndexOutOfBoundsException: 1296 HOT 1
- GPU/CUDA Installation Not Detected HOT 2
- sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
- After manual correction of juicebox convert to fasta
- awk error
- Java memory error
- ***! Error! Either inter.hic or inter_30.hic were not created HOT 4
- The sample data link in the wiki docs are no longer accessible
- More restriction enzyme sites of Arima than Juicer provided, how to modified juicer.sh HOT 4
- Juicer memory usage
- Installation files absent HOT 1
- Error while Normalizations HOT 1
- juicebox format to fasta: coordinates conversion error HOT 1
- error with Java when generating out_JBAT.assembly following Yahs protocol (Yet another HIC scaffolding tool)
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from juicer.