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Related Issues (20)
- Can I generate an asymmetric .hic file for an asymmetric matrix, and to illustrate the unsymmetric matrix by JuiceBox? HOT 3
- Same chromosome, same hic-data, different scaffolding results
- Is it possible to calculate interchromosomal interactions using juicer? HOT 1
- awk: fatal: cannot open file /splits/hic.fastq.gz_norm.txt' for reading (No such file or directory)
- > Unknown command: statistics
- Calculating norms for zoom BP_100000java.lang.ArrayIndexOutOfBoundsException: 1296 HOT 1
- GPU/CUDA Installation Not Detected HOT 2
- sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
- After manual correction of juicebox convert to fasta
- awk error
- Java memory error
- ***! Error! Either inter.hic or inter_30.hic were not created HOT 4
- The sample data link in the wiki docs are no longer accessible
- More restriction enzyme sites of Arima than Juicer provided, how to modified juicer.sh HOT 4
- Juicer memory usage
- Installation files absent HOT 1
- Error while Normalizations HOT 1
- juicebox format to fasta: coordinates conversion error HOT 1
- error with Java when generating out_JBAT.assembly following Yahs protocol (Yet another HIC scaffolding tool)
- strange output of merged1.txt
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