Comments (2)
Something else that comes as a result of this is that the pair_coeff
probably needs to be added to the potential_parameters
, in someway like this
potential_parameters = {
'pair_coeff': {
'Al': ['1*2', '2'],
'Si': ['*', '*'],
}
}
One would need to check that the atoms defined there are present in the given potentials, or otherwise raise a warning.
In general for the dynamic inputs part one needs to have the following
- Check that all the potentials given have the same
pair_style
- Group by potential file, to make sure that if the same file is used for several atoms only one line is written and not several
- Change the input generation so that when the atom which is being treated is given one takes the key of the input_namespace
- Check that only elements are given as keys in the input_namespace
- By default if nothing is given the
pair_coeff
should be set to* *
from aiida-lammps.
This is going to be something to be discussed in a post-release patch, as it is not critical right now and it should not affect other cases when one is using only one potential file.
from aiida-lammps.
Related Issues (20)
- Allow for other `pair_style` HOT 2
- Allow for dynamically computing vectorial properties HOT 8
- Change name of Arrays that does not conform to AiiDA naming convention HOT 1
- Add tests for the new base calculation HOT 1
- dump keyword HOT 2
- minimize.energy_tolerance: 0 HOT 2
- Add possibility to run any LAMMPS script HOT 6
- Naming of `CalcJob` plugins HOT 3
- Handling of the restarfile HOT 2
- Adding CODECOV token explicitly to avoid issues with the github actions HOT 5
- Removal of deprecated features HOT 3
- Example for running from file missing HOT 1
- :ok_hand: Expanding the list of required values in the `LammpsPotentialData` HOT 1
- :books: Update README.md HOT 1
- :books: Docs: Documentation overhaul HOT 4
- Remove unnecessary inputs from the calculation HOT 1
- :recycle: Add warnings and errors to the parsing HOT 5
- Return non zero exit code if LAMMPS errors out in the raw calculation HOT 2
- Add an explicit way to get extra retrieved files in the calculations HOT 3
- Make release 1.0.0 HOT 1
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