Comments (4)
@zachmullen @brianhelba Is there any tips you could share after working with TCGA and https://github.com/DigitalSlideArchive (https://slide-atlas.org/) which is also based on girder ?
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Where should this be hosted for testing?
I don't know what is the time needed to run all those 100 datasets, but I don't think these should be used for continuous testing. We can put them on Midas. Please discuss on Wed radiomics call.
from pyradiomics.
Drop box link to about a third of the TCGA data set:
https://www.dropbox.com/sh/q1if0ya0dfohr5h/AADlaWi-YYjTmFxSm1kZT9Via?dl=0
from pyradiomics.
I believe there is no longer a need for this
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Related Issues (20)
- create loop for feature extraction
- Kernel dies for example file
- ROI cropping and segmentation HOT 2
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- [BUG] pypi version mismatch HOT 2
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- input into pyradiomics: convert npy file into nrrd (segmentation file)
- [FEAT EXTRACTION]
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