aiminy Goto Github PK

3utr-seq

aiminy.github.io

atac_dnase_pipelines

ATAC-seq and DNase-seq processing pipeline

atacseq

awesome-single-cell

List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

bayesian-regression

A Bayesian method for genomic prediction and association study

bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

bigdatascript

BigDataScript: Scirpting language for big data

bioinf525

ATAC-seq lab for BIOINF525

biotoolbox

Tools for querying and analysis of genomic data

biotoolbox-extra

Specialized, outdated, and/or esoteric scripts from BioToolBox

cafa-toolset

A software package for managing the CAFA community experiment

callsomaticvariation

A repository to process and call somatic variation from NGS dataset

chip-seq-3

chip-seq-analysis

ChIP-seq analysis notes from Tommy Tang

chipseeker

:dart:ChIP peak Annotation, Comparison and Visualization

chipseq

chipseq2

clusterprofiler

:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters

code_bti

dapars

DaPars(Dynamic analysis of Alternative PolyAdenylation from RNA-seq)

deindexer

an easy deindex tool for illumina multiple barcodes sequencing

detainedintrons

drawvenn

enm

This is a mathematical model for studying the temporal behaviour of protein structure on the coarse-grained level

escop

A novel Empirical Side Chain Orientation Potential for native protein structure discrimination

example-clojure

Example Clojure integration with Codecov

flowcytometryscripts

flowr

git-notes