alaincoletta Goto Github PK

.nvim

My Neovim configuration in one single file

alaincoletta.github.io

testing pages.github

ask-fsdl

Document Q&A over The Full Stack's Corpus

bitcoin

Bitcoin Core integration/staging tree

blog_genomelink.eu

A minimal, responsive, and feature-rich Jekyll theme for technical writing.

cage_bage

Scripts that accompany paper "Refining epigenetic prediction of chronological and biological age".

crawl4ai

🔥🕷️ Crawl4AI: Open-source LLM Friendly Web Crawler & Scrapper

cs231n.github.io

Public facing notes page

data-mining-with-python

deeplai

Deep learning methods for local ancestry inference.

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

dev-environment-files

dnam-based-age-predictor

A chronological age predictor based on DNA methylation

dnam_pipelines_and_biomarkers

dnamage-predictor

Help researchers to predict DNAmAge of various tissues.

dotfiles

eager

A fully reproducible and state of the art ancient DNA analysis pipeline

epigenetic_ageing_clock

Biological insights into the epigenetic ageing clock

forestry.io

Forestry.io website

genotype_imputation_pipeline

Final version of the pipeline for processing TOPMED and other dbGaP datasets, includes: automatic identification of reference genome build and selection of correct chain file, mapping to GRCh37 reference build, initial quality control, ancestry analysis, post-ancestry quality control, phasing, imputation, post-imputation quality control.

germline2

🌿 Efficiently identifying shared genetic segments in large-scale data

gpt-oracle-trainer

gptflix

Simple Pinecone + OpenAI framework. Now accepting SAFEs at 35M$ cap (get it?)

guides

A guide for programming in style.

gwas

A pipeline for Genome Wide Association Studies

gwasbot

hic

Analysis of Chromosome Conformation Capture data (Hi-C)

introtodeeplearning

Lab Materials for MIT 6.S191: Introduction to Deep Learning

kallisto-sra

llama-int8

Quantized inference code for LLaMA models