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Alm Laboratory's Projects

adaptml icon adaptml

Automatically partition a phylogeny according to genetic and ecological data

analysis-salt-responsive icon analysis-salt-responsive

Analysis of 16S sequencing data for paper "Salt-responsive gut commensal modulates TH17 axis and disease"

angst icon angst

Analyzer of Gene and Species Trees

bio-ml icon bio-ml

Command lines for the BIO-ML resources

gmbc_hgts icon gmbc_hgts

Scripts and data resources from the HGT analysis of GMbC isolate genomes

info icon info

Lab info, useful resources, and other common goods

mystic icon mystic

Inferred biomass biogeochemical model of Mystic Lake

rf-classifier icon rf-classifier

Wrapper for random forest classifier in python scikit-learn package.

texmexseq icon texmexseq

Treatment Effect eXplorer for Microbial Ecology eXperiments

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