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amritchie's Projects

beast2 icon beast2

Bayesian Evolutionary Analysis by Sampling Trees

fish-diversity-molecular-evolution icon fish-diversity-molecular-evolution

Data and code for Ritchie et al. (2022) Diversification rate is associated with rate of molecular evolution in ray-finned fish (Actinopterygii)

language-tree-priors icon language-tree-priors

Sample BEAST 2 control files for Ritchie AM & Ho SYW: Influence of the tree prior and sampling scale on Bayesian phylogenetic estimates of the origin times of language families

noneqmutsel icon noneqmutsel

Data & Code for "Inferring the number and position of changes in selective regime in a non-equilibrium mutation-selection framework"

sim_evolving_rates_molecular_dates icon sim_evolving_rates_molecular_dates

Simulations for Ritchie AM, Hua X, Bromham L, Investigating the reliability of molecular estimates of evolutionary time when substitution rates and speciation rates vary.

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