andrewmoorman Goto Github PK
Name: Andrew Moorman
Type: User
Company: Memorial Sloan Kettering Cancer Center
Bio: Computational Biologist at Single Cell Analysis and Innovation Lab (SAIL) | Dana Pe'er Lab
Name: Andrew Moorman
Type: User
Company: Memorial Sloan Kettering Cancer Center
Bio: Computational Biologist at Single Cell Analysis and Innovation Lab (SAIL) | Dana Pe'er Lab
A python wrapper for Alpha Vantage API for financial data.
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
:mag_right: :chart_with_upwards_trend: :snake: :moneybag: Backtest trading strategies in Python.
Bayesian Segmentation of Spatial Transcriptomics Data
CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.
CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
Utilities for simplifying interactions with cluster computing resources
Cromwell Output Transfer
Tests for configuring Cromwell with an LSF job scheduler and container-based workflows
Docker container with CellPose and Python utility scripts
Dockerized CellRanger multi application
Docker container with Fiji and Python utility scripts
SCRI tutorial for workflow management using Docker
mgatk: mitochondrial genome analysis toolkit
Nextflow workflow to process 10x Xenium spatial gene expression data
Subpopulation detection in high-dimensional single-cell data
An OSLOM Runner for Python.
Single-Cell Analysis in Python. Scales to >1M cells.
SCING: Single-Cell pIpeliNe Garden (pronounced as "sing" /siŋ/)
A collection of Jupyter notebooks which automate the creation of input files for SCING pipelines
SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data
Python tool for alignment of spatial transcriptomics (ST) data using diffeomorphic metric mapping
Utilities for interacting with TIFF files in Python
WDLized Cell Ranger GEX
SAIL tutorial to create workflow with WDL
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.