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automatizar

colocard automation scripts

avalanche_mbcl

Fork of Avalanche for SIRAD

bcdc-metadata

Interim repository for BCDC metadata per quarter.

bedrock

The Docker base image that's solid as a rock

benchmark-metadata

Metadata specification and upload instructions for BossDB images, experiments, and annotations

biologicalgraphs

Biologically-Constrained Graphs for Global Connectomics Reconstruction

blast-tools

Repository for BLAST Simulation tools

boss

Main repo for the Boss API

boss-manage

Repo for Boss configuration and management software

boss-tools

Utilities and libraries used across Boss applications

bossdb-collab-notebooks

Collection of public notebooks for all projects on BossDB

bossdb_cookbook

The BossDB Cookbook is a collection of introductory notebooks and examples for interfacing with the BossDB system.

bossphorus

A BossDB-like volumetric datastore in Rust

bossphorus-python

bossphorus is a simple volumetric datastore for dense 3D data.

chunkflow

Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation

cloud-volume

Read and write Neuroglancer datasets programmatically.

colocar

tools for sparse human annotation of three-dimensional [neuroscience] datasets

colocart

Easy static-site build and deployment to AWS s3.

connectome_nri

cortical_transformers_22

crimson-test

cwl-airflow-parser

dotmotif

A performant, powerful query framework to search for network motifs

dotmotif-vscode

echo-secure

Go library that uses Google oAuth2 authentication and custom authorization for the echo framework.

echotorch

A Python toolkit for Reservoir Computing and Echo State Network experimentation based on pyTorch. EchoTorch is the only Python module available to easily create Deep Reservoir Computing models.

electrode

electrode

emannotationschemas

Repository to hold schemas for annotations of volumetric imaging data focused on EM

emcv

Electron Microscopy Computer Vision

flyemflows