Name: Sam Arsenault
Type: User
Company: Harvard University
Bio: Postdoctoral Researcher in Buck Trible's Lab at Harvard University studying supergenes and their effect on complex phenotypes in ants.
Location: Cambridge, MA, USA
Sam Arsenault's Projects
A beautiful, simple, clean, and responsive Jekyll theme for academics
Repository containing the bioinformatic analyses performed for the manuscript "Simple inheritance, complex regulation: supergene-mediated fire ant queen polymorphism"
Repository containing the bioinformatic analyses performed for the manuscript "Direct and indirect effects of a social supergene"
Personal Website for Sam Arsenault based on the al-folio template
Snakemake pipeline for generating variant based counts files from aligned reads
Fork of the main branch to modify for updated FASRC cluster
Test pipeline for performing RNA-seq analysis with STAR from raw reads to counts files.
Pipelines for various analyses
A template for standard compliant snakemake-workflows
Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.
Generate a series of windowed phylogenies with associated metrics based on a .vcf input