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Name: Arun Subramaniyan
Type: User
Name: Arun Subramaniyan
Type: User
abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
A beautiful Jekyll theme for academics
Assembly methods for nanopore-based metagenomic sequencing: a comparative study
Application notes for the F1 EC2 Instance
BaseJump STL: A Standard Template Library for SystemVerilog
This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
Convolutional Basecaller for Oxford Nanopore Reads
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
Building upon BWA-MEM2, this repository includes performance improvements to the seeding and mate-rescue steps.
A single molecule sequence assembler for genomes large and small.
A complete computer science study plan to become a software engineer.
elPrep: a high-performance tool for preparing sequence alignment/map files in sequencing pipelines.
Reference workloads for modern deep learning methods.
De novo assembler for single molecule sequencing reads using repeat graphs
Data intensive science for everyone.
Official code repository for GATK versions 4 and up
Official code repository for GATK versions 1.0 through 3.7 (full licensed package). For GATK 4 code, see the https://github.com/broadinstitute/gatk repository
End-to-end SoC simulation: integrating the gem5 system simulator with the Aladdin accelerator simulator.
SDK for GPU accelerated genome assembly and analysis
A benchmark suite to study the performance characteristics of genomics applications
Accelerated kernel library for genomics
Code for GWAS logistic regression project
H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)
my academic site and blog
Code required for analysis of Host and Microbe presented in: Integrating Host Response and Unbiased Microbe Detection for Lower Respiratory Tract Infection Diagnosis in Critically Ill Adults
C library for high-throughput sequencing data formats
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.