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Name: Arya Massarat
Type: User
Company: Gymrek Lab, UCSD
Bio: Bioinformatics and System Biology PhD Student
Name: Arya Massarat
Type: User
Company: Gymrek Lab, UCSD
Bio: Bioinformatics and System Biology PhD Student
Scripts, recipes, and docs for conda packages
A complete Snakemake pipeline for detecting allele specific expression in RNA-seq
The website of the Baha'i Club at UC San Diego
Conda recipes for the bioconda channel.
Package conda environments for redistribution
A demonstration of using GitHub actions to build and push reproducible, conda-based Docker containers with best practices
Automated flower species classification for generating honey-bee foraging maps
Automate BBQ request submission to the Harvey Mudd Dining Hall
Evaluate de novo motif finding tools
A comprehensive update to the PLINK association analysis toolset. Beta testing of the first new version (1.90), focused on speed and memory efficiency improvements, is finishing up. Development is now focused on building out support for multiallelic, phased, and dosage data in PLINK 2.0.
Analyzing single cell ATAC data from the brains of drugged rats
This is the development home of the workflow management system Snakemake. For general information, see
A cross-species gene coexpression analysis in cerebral cortical tissue
An (unofficial) Stepik command line interface for students
Allele-specific expression (ASE) for short tandem repeats (STRs)
Benchmarking long-read STR callers
An accumulation of transit-related project information for the SoCal region
Benchmarking variant callers for long read data
Use an ensemble of variant callers to call variants from ATAC-seq data
WASP: allele-specific pipeline for unbiased read mapping and molecular QTL discovery
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.