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2017-cicese-metagenomics

amber

AMBER: Assessment of Metagenome BinnERs

angus

Materials for Analyzing Next-Generation Sequencing (ANGUS) course.

apffdb

Anhui Province Food Animals Fecal Contamination Database

characterizing-args

charcterizing antibiotic resistance genes.

comp-genomics-class

Code and examples for JHU Computational Genomics class

concoct

Clustering cONtigs with COverage and ComposiTion

db

Scripts and databases for amplicon and metagenome

django-vue-admin

基于RBAC模型权限控制的中小型应用的基础开发平台,前后端分离,后端采用django+django-rest-framework,前端采用vue+ElementUI,移动端采用uniapp+uView(可发布h5和小程序).

groopm

Metagenomic binning suite

latentstrainanalysis

Partitioning and analysis methods for large, complex sequence datasets

learngit

listen1_chrome_extension

one for all free music in china (chrome extension, also works for firefox)

mapfa

Metagenomic Analysis Pipeline for Food Animals

metagenome

Metagenome analysis pipeline

microservices-python

panoptes

Monitor computational workflows in real time

readfq

A simple tool to calculate reads number and total base count in FASTQ file

rocketry

Modern scheduling library for Python

schedule

Python job scheduling for humans.

snakemake-executor-plugin-lsf

A Snakemake executor plugin for submitting jobs to a LSF cluster

snakemake-profiles-lsf

Snakemake profile for running jobs on an LSF cluster

solidbin

A genome binning method for contig binning, based on semi-supervised spectral clustering method.

theclinicalknowledgebase_spider

A samll spider for obtaining the available genes' variants of the Clinical Knowledgebase.

watchlist

a demo learning flask