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Ásmundur Oddsson's Projects

awesome-emacs icon awesome-emacs

A community driven list of useful Emacs packages, libraries and others.

courses icon courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

drake icon drake

Data workflow tool, like a "Make for data"

finemap-psa icon finemap-psa

simple fine mapping script in R used as the basis for analyses in Bowes et. al (2015), Dense genotyping of immune-related susceptibility loci reveals new insights into the genetics of psoriatic arthritis.

go icon go

The Open Source Data Science Masters

hpo-annotation-data icon hpo-annotation-data

Collection of annotations of HPO classes to several different disease and syndromes - rare and common

hyi icon hyi

Code for the application of HyI and some other network metrics.

ldsc icon ldsc

LD Score Regression (LDSC)

orgpaper icon orgpaper

Reproducible Research Papers using Org-mode and R: A Guide

phenolyzer icon phenolyzer

phenotype-based prioritization of candidate genes for human diseases

qqman icon qqman

R code for creating Manhattan plots and Q-Q plots for GWAS

r-graph-catalog icon r-graph-catalog

All graphs in “Creating More Effective Graphs”, made with R package ggplot2.

tawny-owl icon tawny-owl

Build OWL Ontologies in a Programmatic Environment

textract icon textract

extract text from any document. no muss. no fuss.

topodombar icon topodombar

Phenotypic analysis of microdeletions and toplogical chromosome domain boundaries

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