atrevinoflitton Goto Github PK

biojava-dna-2-protein

Utilizes Biojava and Java Swing to open a FASTA sequence file to return for reach reading frame the DNA, RNA, and protein sequences

blast-results-parser

A program to parse local BLASTx results ideal for report summaries, utilizes a GUI where additional comments can be included and saved.

book-exercises

cheatsheets

RStudio Cheat Sheets

database-dev-sql

Implementation of a SQL database from scratch

dge_workshop

dictionary-builder

fasta-comment-parser

Parses the comment, or title, lines of a FASTA formatted sequence document and saves them to a text file to local system.

fasta-seq-search

Parses a FASTA document for the user provided sequence ID to return the sequence. Extends a DNA class with additional tools

genbank-parser

Utilizes Java Swing to read in & parse local GenBank file

markdown-here

Google Chrome, Firefox, and Thunderbird extension that lets you write email in Markdown and render it before sending.

protein-domain-finder

Searches FASTA formatted sequences for either a Zinc Finger, MARCKS Family, or Leucine Zipper protein domains

seq-codon-protein-translator

Java program to read in DNA seq file and return the three forward reading frames and their single letter protein code

vimsheet

Vim cheat sheet from beginners to pros