augustinas1 Goto Github PK
Name: Augustinas Sukys
Type: User
Bio: PhD Student at The Alan Turing Institute & The University of Edinburgh
Location: Edinburgh, United Kingdom
Augustinas Sukys's Projects
catalyst.jl
Chemical reaction network and systems biology interface for scientific machine learning (SciML). High performance, GPU-parallelized, and O(1) solvers in open source software
cellcycle-rnaseq
Code for paper
datadrivendiffeq.jl
Data driven modeling and automated discovery of dynamical systems for the SciML Scientific Machine Learning organization
deepcycle
Cell cycle inference in single-cell RNA-seq
diffeqsensitivity.jl
A component of the DiffEq ecosystem for enabling sensitivity analysis for scientific machine learning (SciML). Optimize-then-discretize, discretize-then-optimize, and more for ODEs, SDEs, DDEs, DAEs, etc.
finitestateprojection.jl
Finite State Projection algorithms for chemical reaction networks
gaia-source-classification
Machine learning methods to classify objects observed by the European Space Agency's Gaia space telescope
keras
Deep Learning for humans
momentclosure.jl
Tools to generate and study moment equations for any chemical reaction network using various moment closure approximations
nessie
Neural Estimation of Stochastic Simulations for Inference and Exploration
shap
A unified approach to explain the output of any machine learning model.
testpackage.jl
This is an example package -- testing how it all works
txburst
Transcriptional burst kinetics inference and analysis described in the article "Genomic encoding of transcriptional burst kinetics" (Larsson et. al 2019).
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