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Anthony Holmes's Projects

adtree icon adtree

Accurate, Detailed, and Automatic Modelling of Laser-Scanned Trees

areal icon areal

R package for areal interpolation

canopylazr icon canopylazr

R package to estimate leaf area density (LAD) and leaf area index (LAI) from airborne LiDAR point clouds

ctsm icon ctsm

Community Terrestrial Systems Model (includes the Community Land Model of CESM)

dart icon dart

Data Assimilation Research Testbed

deepforest icon deepforest

Python Package for Tree Crown Detection in Airborne RGB imagery

deeplidar icon deeplidar

LIDAR and RGB Deep Learning Model for Individual Tree Segmentation

deeptreeattention icon deeptreeattention

Implementation of Hang et al. 2020 "Hyperspectral Image Classification with Attention Aided CNNs" for tree species prediction

foresttools icon foresttools

Detect and segment individual tree from remotely sensed data

gephi icon gephi

Gephi - The Open Graph Viz Platform

lidr icon lidr

R package for airborne LiDAR data manipulation and visualisation for forestry application

lme4 icon lme4

Mixed-effects models in R using S4 classes and methods with RcppEigen

lt-gee icon lt-gee

Google Earth Engine implementation of the LandTrendr spectral-temporal segmentation algorithm. For documentation see:

matss icon matss

R Package for Macroecological Analysis of Time Series Structure (MATSS)

neon-data-skills icon neon-data-skills

Self-paced tutorials and classroom teaching modules that review key data literacy concepts and data analysis skills. Published materials can be found at neonscience.org/neondataskills

neon-utilities icon neon-utilities

Utilities and scripts for working with NEON data. Currently: an R package with functions to join (stack) the month-by-site files in downloaded NEON data, to convert data to geoCSV format, and to download data from the API.

pointcnn icon pointcnn

PointCNN: Convolution On X-Transformed Points (NeurIPS 2018)

pyeo icon pyeo

Python Earth Observation processing chain

r-bridge-tutorial-notebooks icon r-bridge-tutorial-notebooks

Jupyter notebooks demonstrating setup and use of the R-ArcGIS bridge. The repo includes datasets required to run the Jupyter notebooks.

retriever icon retriever

Quickly download, clean up, and install public datasets into a database management system

rgedi icon rgedi

rGEDI: An R Package for NASA's Global Ecosystem Dynamics Investigation (GEDI) data downloading, visualization and processing.

rlidar icon rlidar

rLiDAR — LiDAR Data Processing and Visualization

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