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Jun Geng's Projects

biopycourse icon biopycourse

Python short course for graduates in biology and biochemistry

biopython icon biopython

Official git repository for Biopython (converted from CVS)

cobrame icon cobrame

A COBRApy extension for genome-scale models of metabolism and expression (ME-models)

d3 icon d3

Bring data to life with SVG, Canvas and HTML. :bar_chart::chart_with_upwards_trend::tada:

d3-hierarchy icon d3-hierarchy

2D layout algorithms for visualizing hierarchical data.

d3-shape icon d3-shape

Graphical primitives for visualization, such as lines and areas.

deeplearning-500-questions icon deeplearning-500-questions

深度学习500问,以问答形式对常用的概率知识、线性代数、机器学习、深度学习、计算机视觉等热点问题进行阐述,以帮助自己及有需要的读者。 全书分为18个章节,50余万字。由于水平有限,书中不妥之处恳请广大读者批评指正。 未完待续............ 如有意合作,联系[email protected] 版权所有,违权必究 Tan 2018.06

dlwpt-code icon dlwpt-code

Code for the book Deep Learning with PyTorch by Eli Stevens and Luca Antiga.

escher icon escher

Build, view, share, and embed pathway maps.

faceswap icon faceswap

Non official project based on original /r/Deepfakes thread. Many thanks to him!

fit-sne icon fit-sne

Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)

gecko icon gecko

Toolbox for including enzyme constraints on a genome-scale model.

git-extras icon git-extras

GIT utilities -- repo summary, repl, changelog population, author commit percentages and more

handson-ml icon handson-ml

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in python using Scikit-Learn and TensorFlow.

ht17 icon ht17

HT17 Courses material from the Bioinformatics Core Facility staff, Sahlgrenska Academy, Gothenburg University

keff_mapping icon keff_mapping

Scripts to reproduce ME-model simulations from "Machine learning applied to enzyme turnover numbers reveals protein structural correlates and improves metabolic models"

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