Comments (7)
The base image is pinned: https://github.com/BackofenLab/docker-galaxy-graphclust/blob/master/Dockerfile#L3
I removed the automatic link to the galaxy-stable image, which gets rebuild every 24h, to get latest updates and bugfixes - imho we should keep this.
The interesting question is what broke and why? ;)
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Where is this automatic link to the galaxy-stable image :-D?
The main reason is there are many entities (conda builds, toolshed wrappers) not in control of this repository. So I would prefer to have the released latest versions tested ;-)
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@bgruening The workflow currently fails to open: Error is Following tools missing: [u'toolshed.g2.bx.psu.edu/repos/bgruening/infernal/infernal_cmbuild/1.1.0.2']
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We can pin TS revisions to prevent this. But in general you can simply tag git releases and then you get a Docker pinned image. This can also point to latest.
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Good idea, we tag latest release with 'latest' and master branch with 'development'
I removed the automatic link to the galaxy-stable image,
This I don't get. The dockerfile is not changed, where was the automatic link?
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Let's discuss this tomorrow and I will show you how to do this.
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👍
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Related Issues (20)
- Locarna Free-endgaps option for collect results HOT 3
- Improve wrapper namings HOT 5
- Master 'dev/ version needs more testing HOT 19
- Parallel mode for NSPDK vectorizer
- Improving readme HOT 2
- R-scape output HOT 3
- Documentation and tour on how to import a workflow
- Add e-value to CLUSTERS table
- With recent updates Workflows are not automatically added during docker build HOT 6
- Gspan group option
- rnafold and rnafold-SHAPE workflows can be merged to avoid redundancy
- conda issue for dependencies HOT 5
- Upgrade to 17.09 fails HOT 2
- cmbuild/cmcalibrate multi-threading HOT 8
- nspdk_candidate_clusters non data-collection svector
- nspdk_candidate_clusters multi round _m output can be merged
- Galaxy 18.05 docker HOT 1
- GraphClust-2 on RNA-seq data? HOT 2
- RNA type identification after graphclust analysis HOT 10
- Optimizing Parameters for Larger Motif Window
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