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validator module about bep028_bidsprov HOT 11 OPEN

remiadon avatar remiadon commented on August 28, 2024
validator module

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cmaumet avatar cmaumet commented on August 28, 2024 1

Once we'll have the spec ready, it will be a PR to the repo.

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cmaumet avatar cmaumet commented on August 28, 2024 1

Great! Can you update https://github.com/Inria-Visages/BIDS-prov/projects/1 accordingly?

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cmaumet avatar cmaumet commented on August 28, 2024

@remiadon: +1 for the validator.

Because the model will be BIDS-compatible, it would be useful to build of the BIDS validator: https://github.com/bids-standard/bids-validator

For a demo see here: https://bids-standard.github.io/bids-validator/

The BIDS validator is very consistent in spirit with what you described except that it takes a BIDS folder as input (and not only the json file).

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remiadon avatar remiadon commented on August 28, 2024

@cmaumet I'm not sure to understand. Should we make PRs to the repo you mentionned or provide something in the same spirit ?

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remiadon avatar remiadon commented on August 28, 2024

EDIT : pySHACL seems to be a good place to start

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cmaumet avatar cmaumet commented on August 28, 2024

Yes for RDF validation.

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cmaumet avatar cmaumet commented on August 28, 2024

@remiadon: I beleive this issue should be removed from "sprint 2", are you fine with that?

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remiadon avatar remiadon commented on August 28, 2024

@cmaumet yep I'll save this for later

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remiadon avatar remiadon commented on August 28, 2024

Like discussed we will use a shacl file later in the project to tackle this.

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cmaumet avatar cmaumet commented on August 28, 2024

Yes and this will have to live in the BIDS validator. I would say let's leave it aside for now as we focus on the spec and the examples.

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remiadon avatar remiadon commented on August 28, 2024

edit : a CI script to check parsing from SPM is required in #50

A validator module would be awesome so that CI does the following:

  • parse .m files given the new spm parser
  • pass the result into this validator module

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