Related Issues (20)
- NCBI GTF/GFF - support for clinvar VCF
- Error from ENSEMBL URL retry
- replace --list_taxonomies with list_names HOT 2
- Cosmic mutations for celllines HOT 1
- Fasta input for vcf-to-proteindb HOT 8
- Errors and tasks to be implemented HOT 1
- wrong cosmic proteins output HOT 6
- Generating protein DB from custom VCF fails HOT 4
- Cleaning the code HOT 1
- Error: Codon '-CT' is invalid HOT 8
- pyVCF reader deprecated only supported for py3.6
- Implementation of Class FDR HOT 10
- gffread fasta generated file uses space and semicolon HOT 1
- Write urls for download into file instead of downloading
- implement spectrumAI in pypgatk HOT 3
- change var_prefix
- Improve test case to check download
- Incompatible COSMIC mutation records
- vcf-to-proteindb returned incorrect amino acid sequences
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