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Comments (3)

ivokwee avatar ivokwee commented on September 25, 2024

Can we just do this?

prep=pcaMethods::prep
pca=psych::pca
DeconRNASeq(...)
remove(prep,pca)

I will try...

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ivokwee avatar ivokwee commented on September 25, 2024

I tried but doesn't work. I guess prep needs to be in the global enviroment for DeconRNASeq to find it? Or do we need to load/require the library? Or can we insert prep into the DeconRNASeq environment?

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ncullen93 avatar ncullen93 commented on September 25, 2024

oh I get it now... this is an error from the DeconRNASeq package/function because it does not prepend pcaMethods to the prep function. I'm not sure how to fix that. I would guess that the prep = pcaMethods::prep would be the best idea.

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