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100-days-of-ml-code

100-Days-Of-ML-Code中文版

an-introduction-to-statistical-learning

This repository contains the exercises and its solution contained in the book "An Introduction to Statistical Learning" in python.

analysis-workflows

Open workflow definitions for genomic analysis from MGI at WUSM.

awesome-genome-visualization

A list of interesting genome browser or genome-browser-like implementations

bioinfo_leetcode

让我们以刷LeetCode题目的形式，来编程解决生物信息学问题吧，Come on

comut

CoMut is a Python library for visualizing genomic and phenotypic information via comutation plots

deeplearningbook-chinese

Deep Learning Book Chinese Translation

feline_project

getting-started-with-genomics-tools-and-resources

Unix, R and python tools for genomics and data science

gridss-purple-linx

Standalone GRIDSS/PURPLE/LINX pipeline

gtftools

heterogeneity

Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes

hmftools

Various algorithms for analysing genomics data

machine-learning-notes

My continuously updated Machine Learning, Probabilistic Models and Deep Learning notes and demos (2000+ slides) 我不间断更新的机器学习，概率模型和深度学习的讲义(2000+页)和视频链接

mtdna-mutations

scripts to generate figures/tables from Gorelick et al. Nat Metab, 2021

neoloopfinder

A computation framework for genome-wide detection of enhancer-hijacking events from chromatin interaction data in re-arranged genomes

openpbta-analysis

The analysis repository for the Open Pediatric Brain Tumor Atlas Project

pcawg_delly_workflow

A mirror of https://bitbucket.org/weischen/pcawg-delly-workflow

python-100-days

Python - 100天从新手到大师

scrna-seq_notes

A list of scRNA-seq analysis tools

scrna.seq.course

Analysis of single cell RNA-seq data course

shinycircos

an R/shiny application for creation of Circos plot interactively

single-cell-best-practices

https://www.sc-best-practices.org

single-cell-tutorial

Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

statistical-learning-method_code

手写实现李航《统计学习方法》书中全部算法

transferlearning

Transfer learning / domain adaptation / domain generalization / multi-task learning etc. Papers, codes, datasets, applications, tutorials.-迁移学习

variantcallingfjd

vcf2maf

Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms

wags

wally

Wally: Visualization of aligned sequencing reads and contigs