Comments (2)
Hi Sander,
I updated the PhyloPhlAn package in Bioconda that brings also other minor fixes from previous issues reported here.
You can update PhyloPhlAn and check if everything is working now.
Many thanks,
Francesco
from phylophlan.
That works!
Thanks @fasnicar
from phylophlan.
Related Issues (20)
- mach-o file, but is an incompatible architecture (have 'x86_64', need 'arm64') HOT 1
- FastTreeMP returned non-zero exit status 1. HOT 8
- Phylophlan Error HOT 3
- [e] No alignments found to concatenate HOT 1
- [e] mapping file (--maas) not specified HOT 2
- How can I use my own database? HOT 2
- Restart from checkpoint function available HOT 1
- maybee update taxa2core_cpa* to recent uniprot release
- Mapping with Diamond v2 seems slow HOT 1
- UnboundLocalError: cannot access local variable 'uniprotkb2uniref90' where it is not associated with a value
- phylophlan_metagenomic.py - offline usage HOT 1
- RAxML can't parse alignments for which there are sequences made entirely of undetermined characters HOT 1
- Can not download the phylophlan database
- [e] gene_markers_identification crashed HOT 1
- What is the difference between "phylophlan" database and "SGB.XXX"? HOT 2
- Reducing number of RAxML threads to 20, as it appears to underperform with more threads HOT 2
- broken link on wiki
- The generated phylogenetic tree is missing MAGs at the leaf nodes.
- Trouble running example 2 - Tree of Life
- Running partial workflow HOT 1
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from phylophlan.