Comments (3)
Partially addressed in #58
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@mortonjt, since deblur is in the biocore conda recipes, and since its build has a rational dependency chain, isn't it the case that the install example in the readme (currently conda install -c biocore VSEARCH MAFFT SortMeRNA numpy
) can be changed to (conda install -c biocore deblur
)?
from deblur.
Exactly :)
On Wed, Aug 24, 2016 at 11:24 AM, Daniel McDonald [email protected]
wrote:
@mortonjt https://github.com/mortonjt, since deblur is in the biocore
conda recipes, and since its build has a rational dependency chain, isn't
it the case that the install example in the readme (currently conda
install -c biocore VSEARCH MAFFT SortMeRNA numpy) can be changed to (conda
install -c biocore deblur)?—
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Related Issues (20)
- new release: mix case fixing HOT 1
- illumina 1.9 support? HOT 1
- convert float to int HOT 3
- Failure to write BIOM file - OSError: Unable to create file HOT 1
- Deblur workflow output HOT 14
- Indels aren't calculated correctly HOT 6
- Derivation of error profile HOT 2
- Is it possible to turn off chimera checking? HOT 4
- Not sure where counts are going for dominant sequence HOT 1
- "ERROR ...: Problem running vsearch dereplication on file" HOT 1
- bug Mac, error message HOT 1
- Whether deblur trim the read length with multipile sequence alignment? HOT 9
- Crash after saving biom table and attempting to remove artifacts
- Novaseq support HOT 1
- Is there an equivalent deblur-stats output in the stand alone version? HOT 4
- Can you recommend some reference databases (Positive mode) for ITS and 18S sequences? HOT 8
- Question about using Deblur in meta analysis HOT 1
- Deblur installation error HOT 5
- support click 8
- indexdb_rna not found HOT 6
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