Comments (1)
$ go test -run ^$ -bench BenchmarkRead -conc 0 -bench.file input.bam
BenchmarkRead-8 1 6268349263 ns/op
BenchmarkReadCore-8 1 4085225736 ns/op
from hts.
Related Issues (20)
- Invalid .bam output using hts.bam.Writer HOT 20
- Zero length bam records have invalid bin values HOT 5
- iso8601 HOT 4
- bam: reader over allocates in some cases
- csi: malformed dummy bin header HOT 10
- csi: missing chunks from CSI index HOT 9
- header parsing error with CL. HOT 13
- Faster bgzf compression/decompression with libdeflate? HOT 2
- Bam reader error on date format (different format) HOT 6
- Possible issue with SAM record validation HOT 3
- Failure to read reference stats from index HOT 3
- Is the 9827_2%2349.bam file still available? HOT 2
- Record.Qual error HOT 1
- bam: Invalid pos for unmapped SAM record HOT 5
- Different performance after 2 launches HOT 1
- bgzf: Seek() loads wrong block due to readahead caching bug HOT 2
- fai: Reading a fasta file with blank contig names causes invalid offsets HOT 1
- fai: attempting to create an index from a file with ultra long lines fails HOT 3
- bgzf: race? HOT 6
- Bam reader error on date format HOT 3
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from hts.