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aptranscriptome

Transcriptome assembly and gene expression analysis for *Aphaenogaster* ant species

awesome

Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stuff.

awesome-machine-learning

A curated list of awesome Machine Learning frameworks, libraries and software.

awesome-math

A curated list of awesome mathematics resources

bcbb

Incubator for useful bioinformatics code, primarily in Python and R

bioc2015multiomicsworkshop

Challenges and opportunities from integrative analysis of multi-omic data sets

bioinfoalgo

The Repository for my R implementation for the Bioinformatics Algorithms course

bioinfokit

Bioinformatics data analysis and visualization toolkit

bioinformatics

:microscope: Path to a free self-taught education in Bioinformatics!

bioinformatics_notes

Bioinformatics and genomics resources

biolab1

Laboratorio 1 del curso de BioInformatica, dirigido por Manuel Villalobos Cid

biolab3

biolab4

bioperl-pise

Original Pise-based wrappers for BioPerl (obsolete)

blueberries

breakdancer

SV detection from paired end reads mapping

calc-roi-covg

Given two BAM files, a reference sequence, and regions of interest, count the AT, CG, or CpG sites with sufficient read-depth in both BAMs.

caret

caret (Classification And Regression Training) R package that contains misc functions for training and plotting classification and regression models

caret-machine-learning

Practical examples for the R caret machine learning package

cmds

Cohort DNA Copy Number Analysis

coloncancermeth

comparative-transcriptomics-of-ants

Comparative transcriptomics reveals the conserved regulatory building blocks involved in the maintenance and parallel evolution of caste and other phenotypic traits in ants

cookbook

copynumbr

An R package for copy number data (aCGH, SNP arrays)

coursera-machine-learning

source from exercises in Coursera.

courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

d3

A JavaScript visualization library for HTML and SVG.

datasciencecom-mhealth

A tutorial for datascience.com for classifying human activity from body motion and vital signs recordings.

deepcl

OpenCL library to train deep convolutional neural networks

difflogo