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biologger's Projects

amplicon icon amplicon

Statistics and visualization for amplicon data

himap icon himap

High-resolution Microbial Analysis Pipeline: pipeline for processing 16S amplicon sequencing data

htqpcr_ngs_data icon htqpcr_ngs_data

Raw data and code for data analysis of the manuscript: "High-throughput qPCR and 16S rRNA gene amplicon sequencing as complementary methods for the investigation of the cheese microbiota."

speciesprimer icon speciesprimer

The SpeciesPrimer pipeline is intended to help researchers finding specific primer pairs for the detection and quantification of bacterial species in complex ecosystems.

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