Comments (2)
Hi,
As it is specified in the readme of this repository (section "Installation"), falcon should be run on Linux or OSX but not Windows (as explained by @bittremieux in issue #9). Many Linux distributions are freely available and can be installed on a computer (possibly in dual boot with windows) or executed within a virtual machine (see VirtualBox).
Best regards,
Kilian
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The error you see is because the input directory has not been specified correctly. In the example on the main page the directory with peak files is peak/
, in your case this would be E:\MS_RAW_Files\...
, so without the peak/
prefix.
However, even when specifying the input peak files correctly, falcon indeed only runs on Linux or OS X, not on Windows. Possibly the Windows Subsystem for Linux could be used to run falcon in your Windows environment without needing a dual-boot system, but this functionality has not been tested.
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Related Issues (20)
- [Bug] When no retention time is present in MGF, it throws error
- Provide optional rough RT window for clustering
- Error thrown when no cluster was found for at least one charge HOT 1
- Considerably less clusters when scaling is applied HOT 17
- DLL load failed while importing swigfaiss HOT 1
- Further dimensionality reduction HOT 1
- Singleton cluster number
- Memory consumption
- Investigating splitting HOT 4
- Full File Path in output results
- Similar MS/MS did not make it into clusters output HOT 1
- mzML parsing issue HOT 1
- Automatic precursor/fragment mass tolerance
- Precursor m/z correction
- Bug: new version of spectrum_utils changed API interface
- Help needed with error with positional arguments?? HOT 2
- np.object has been deprecated
- Several issues encountered at the execution HOT 6
- MS2 spectra without a precursor charge are ignored HOT 3
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