Comments (2)
Oh gosh, I usually check through the open and closed issues to make sure I am not duplicating efforts. I am embarassed to have missed that one! I will make sure I have the latest version and try again.
EDIT: this was indeed fixed with #52 using the latest code.
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Hey @mikerobeson, thanks for opening the issue! This should have been resolved by #52. Does this look like what you were experiencing? Maybe you could try installing the most up-to-date version? Let me know, if it still doesn't work we may need to look into it again. Thanks!
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Related Issues (20)
- BUG: `index-contigs` fails if any input files are empty HOT 4
- Cannot download some files from the `evaluate-contigs` qzv
- update help text for `assemble-spades --p-meta` HOT 3
- BUG: `assembly assemble-spades` auto-detection of phred-offset error
- BUG: index-contigs collects only .fa files
- BUG: action `generate-reads` is missing the `pysam` dependency HOT 3
- Update help text for `assemble-spades --p-threads --p-memory`
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- ENH: allow passing already aligned reads to `evaluate-quast`
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- BUG: action `assemble-megahit` does not allow for `--p-num-cpu-threads > 1` HOT 3
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- ENH: evaluate-contigs action should output a results table to enable filtering of samples
- ENH: make contig IDs unique across all samples
- ENH: add action to rename contigs
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- ENH: filter contigs by length
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