Comments (4)
On the newest release of qiime2 empress still gives the error "At least one non-root branch of the tree must have a positive length." So setting the edges to some value is still necessary. This could be because nothing in the tree has a specified branch length, but branch length for this application is pretty arbitrary. Working on explicitly setting the node lengths to 0.0 during construction. I also don't think a separate type is necessary.
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I think that step is no longer needed as empress should be able to handle edges w/o a specified branch length. The other option is to just explicitly set the edges to 0.0
during construction. I do not think a separate type is necessary.
from q2-coordinates.
Working on explicitly setting the node lengths to 0.0 during construction
Thanks @zoechallacombe ! This would be ideal!
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Fixed and created a new pull request to merge changes.
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Related Issues (15)
- add distance scale to maps
- enhance visualisation of multiple samples from identical location HOT 1
- refactor readme
- BUG: `draw-*map`: `column` should be optional
- MAINT: Migrate to python 3.8
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- MAINT: newest qiime2 version 2021.2.0
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- Interactive map is sometimes missing
- choropleth maps
- accept custom maps as input
- draw_map: make autoscale optional HOT 1
- geodesic_distance: support optional elevation column
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