bozhang1996 Goto Github PK

202303-only-for-plot

R using 202303

2023_cell_uric_acid_project

bilibilirlearning

Use it with the bilibili vedios.

crassphage_project

Source code for the crAssphage project

data_for_2024_07

data_for_2024_07_CCFM1173

easymetagenome

Easy Metagenome Pipeline 2019 (1.0)

gtdb-species-clusters

Toolkit for establishing, updating, and validating GTDB species clusters

meta

metagenomics

code for metagenomics

metawrap

MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis

microbiome_dmp

Codes and sample data supporting the Dutch Microbiome Project. The preprint is currently available at https://www.biorxiv.org/content/10.1101/2020.11.27.401125v1 and full data can be requested from EGA (https://ega-archive.org/studies/EGAS00001005027) and Lifelines biobank (https://www.lifelines.nl/researcher)

microbiomemarker

R package for microbiome biomarker discovery

orthofinder

Phylogenetic orthology inference for comparative genomics

pengzaiarticle

plot_for_2023_09

R using for plot 202309

plot_for_2024_04

plot_for_2024_06

plot_for_2024_06

plot_for_2024_07

plot_for_2024_07_for_the_CCFM1173

qiime2chinesemanual

QIIME 2中文文档(QIIME 2 Chinese Manual)

resistancegeneidentifier

Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.

salmon

🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment