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Brad Jones's Projects

bbd icon bbd

BEAST2 prior for blind-dating

beast-classic icon beast-classic

Automatically exported from code.google.com/p/beast-classic

beast2 icon beast2

Bayesian Evolutionary Analysis by Sampling Trees

gghighlighter icon gghighlighter

Visualizing multiple sequence alignments and highlighter plots using ggplot2

hcvravorigins icon hcvravorigins

Data for "The global origins of resistance-associated variants in the non-structural proteins 5A and 5B of the hepatitis C virus"

openrdp icon openrdp

An open-source re-implementation of the RDP4 recombination detection program

paddedtipdates icon paddedtipdates

TipDatesWalker operator with padding for BEAST2 to account for floating point precision errors

santa-sim icon santa-sim

A forward-time simulator for gene sequences modeling a variety of mutation and selection processes.

team_bots icon team_bots

Two robots for robotgame.net, ready for the teams to work on

treeio icon treeio

:seedling:Base Classes and Functions for Phylogenetic Tree Input and Output

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