Comments (2)
Hi, at the moment only quantitative phenotypes are supported.
from tensorqtl.
Thanks for the response. We were seeing great performance using tensorQTL but some of our work requires binary phenotypes. Would love to see it supported in the future.
from tensorqtl.
Related Issues (20)
- Issues with TensorQTL in Trans Mode HOT 1
- AttributeError: 'dict' object has no attribute 'T' tensorqtl HOT 2
- broken link HOT 1
- Tensorqtl installation HOT 3
- No credible sets output from susie.map because pval_nominal=0 HOT 3
- ValueError: array must not contain infs or NaNs HOT 1
- interaction HOT 1
- [Susie] ValueError: prior variance must be non-negative HOT 4
- [trans] trans.map_permutations(): KeyError: 'r2' HOT 2
- [map_trans] R2 not returned in interaction analysis HOT 2
- [pval post-processing] Interaction output for cis/trans HOT 1
- Which beta coresponds to which allele in the outputs? HOT 3
- cis-mapping with interaction HOT 1
- Errors in the BackgroundGenerator cause main thread to get stuck HOT 1
- Questions about the `map_permutations` and `apply_permutations` functions
- cis_independent requires covariate_df HOT 1
- Phenotype file format HOT 3
- Any way i can go around this error? HOT 2
- Categorical covariates HOT 1
- Corections for multiple tests for trans-eQTL HOT 1
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