caitsimop Goto Github PK
Name: Caitlin Simopoulos
Type: User
Bio: Figuring out how to use fancy methods to solve fancy problems.
Twitter: caitsimop
Location: Hamilton, ON
Caitlin Simopoulos's Projects
caitlin-academic
crema
Classifying RNAs as lncRNAs by ensemble machine learning algorithms
eutrema_drought_transcriptomics
Code to accompany "Coding and long non-coding RNAs provide evidence of distinct transcriptional reprogramming for two ecotypes of the extremophile plant Eutrema salsugineum undergoing water deficit stress"
lncrna-compgenomics
Using CREMA to identify lncRNAs in diverse plant species
lncrna_conservation
Parsing though lncRNA predictions and identifying conserved molecular traits
metareport
automatic report generation from metalab result
msstatsconvert
Converter functions for the MSstats package
msstatstmt
R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling
pca_ggplots
PCA biplots with ggplot2
precise-db
A high-fidelity E. coli RNA-seq compendium
r_sessions
Informal R sessions for Golding/Weretilnyk labs!
reproducible-figs
Showing you the benefits of reproducible figures :)
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