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amplicr

An R package to process amplicon data

bdskytools

A package containing several useful R-functions for reading and plotting the results of Birth-Death Skyline (BDSKY) runs in BEAST2.

beast2

Bayesian Evolutionary Analysis by Sampling Trees

beasthandler

Useful functions to facilitate BEAST analyses

camtrapr

R package for camera trap data management

camtraprassistant

A R package that assists camtrapR by providing more functionalities and flexibility

camtraprdeluxe

camtrapRdeluxe

carlo-tim-sampling-study

dada2

Fast, accurate, single-nucleotide resolution for amplicon data. INSTALLATION INSTRUCTIONS AND TUTORIAL ON THE FRONT PAGE:

dartr

Importing and Analysing DArT type snp and silicodart data

dartr.captive

dartRverse package - provides functions to support and analyse captive breeding

dartr.popgen

package that deals with popgen functions within the dartRverse

dartr.spatial

Spatial functions for the dartRverse

epiinf

BEAST 2 package for performing inference on epidemiological parameters using the exact likelihood.

genelandhandler

An R package to support analyses with Geneland

genotype-spim

genoSPIM in nimble

hexsimr

an R package for post HexSim simulation analysis

judas

Analysis of control operations with Juda animals

mtracer

mtraceR

pophelper

An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.

rbeast2

vortexr

an R package for post Vortex simulation analysis

vortexrdata

Supplementary raw data for the R package vortexR

wdtrappinganalysis

wpdata

Whiteman Park trapping data analysis