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Cato Hastings's Projects

cftrconductance icon cftrconductance

Implementing a simple model to estimate the conductance of CFTR using data from CFTRimg quenching experiements.

cftrimg icon cftrimg

An image analysis tool to estimate localisation and function of CFTR, the protein which, when mutated, causes cystic fibrosis.

diamond icon diamond

DIseAse MODule identification algorithim

grid-spikes icon grid-spikes

An image analysis pipeline for analysing spikes in calcium activity.

hexca icon hexca

Modelling calcium ion dynamics on a fixed hexagonal grid

lesser-house-boids icon lesser-house-boids

Simulating flight behaviour of the lesser house fly with an agent-based approach.

neighbourhood-streak icon neighbourhood-streak

Implementation of two models which study how positional information is encoded and interpreted in the developing embryo.

pomdp icon pomdp

Implementing a RL algorithm based upon a partially observable Markov decision process.

ppi-network icon ppi-network

Implementing a bioinformatics pipeline, identifying driver genes in bladder cancer using a network-based approach.

primitive-streak icon primitive-streak

A model of protein interactions important in primitive streak formation during chick embryonic development.

shucks icon shucks

Web application using Python/Flask, which helps users solve cryptic crosswords.

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