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ChandlerBang avatar ChandlerBang commented on May 24, 2024

Hi shaolyy,

Q1: I used GPU V100 (32GB) for Pubmed dataset since ProGNN can only deal with dense matrix. For other datasets, 12GB GPU Memory should be enough.

Q2: The parameter settings of GCN are lr=0.01, weight_decay=5e-4, epoch=200, dropout=0.5 (same as that in the GCN paper). For the performance inconsistency, I just checked my original implementation and found the difference is caused by the different data splits. In my experiments of Pubmed dataset, I mistakenly used get_train_test_val(..., stratify=onehot_labels) while it is get_train_test_val(..., stratify=labels)in other datasets.

Now I've updated the code in train.pyto generate the same data splits as in my experiments. Now you can update this repository and match the performance.

Thanks.

from pro-gnn.

shaoyf9 avatar shaoyf9 commented on May 24, 2024

Thank you very much for your reply, I will update the code.

from pro-gnn.

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