Comments (2)
@kallisons Thanks for the comment. We have updated the README.md file in an effort to provide specific instructions. I have the feeling the number of other software needed makes the concept impractical?
Any feedback or suggestions greatly appreciated.
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The README.md instructions are helpful! I definitely appreciate the note that >20GB of data need to be processed. I actually find this to be more of a inhibiting factor to reproducing your analyses than the software needed. (I had all of the software except for BSMAP and bedtools already installed.) I don't have enough HD space on my laptop to actually execute your code so unfortunately I will not be able to give you more specific comments on any missing dependencies.
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