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atac_dnase_pipelines

ATAC-seq and DNase-seq processing pipeline

behavflow

automating the workflow of collecting rodent behavioral data

bootstrap-datepicker

A datepicker for twitter bootstrap (@twbs)

chenlab.us

chilibot

compiled_matrix_view

10X Chromium data of inbred rats mapped against mRatNor1

darkrodents

Windows and Linux version of Darknet Yolo v2 & v3 Neural Networks for object detection

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

deepwas

DeepWAS: Directly integrating regulatory information into GWAS using machine learning

dnn4g2p

Using deep neural network to predict coat color from SNP data

eqtl_app

visualize eQTL from the heterogeneous stock rats

flask-progress-bar

latexscripts

linux-at-univesity-of-tennessee

Using Linux at the University of Tennessee

longranger

scripts for running longranger on clusters

oliz

opar-website

Omics Portal For Addiction Research main site

openbehavior

Building rodent behavioral testing devices using the Raspberry Pi computer.

proc10xg

processing 10x genomics reads

rat_pangenome

ratremor

Measure tremor in rats

ratsocialinteractiontest

ratspub

Using PubMed to find out how a gene contributes to addiction.

rn6_assembly_error_app

rnaseq_5500xl

sars-cov-2

Open source genomic data and analysis of SARS-CoV-2

save_loupe_matrixview

slides

tailtimer

A device for automating the tail immersion assay

talks