Comments (5)
Tagging @swails to see what he thinks.
from ambermini.
The more you add to ambermini
the more of a time sink it becomes to maintain (by the way, AmberTools 16 was released on April 30th).
If reduce is already available in a conda channel, I would say either copy it from there or just add that channel to your conda environment. Excising it into ambermini will be a PITA.
from ambermini.
The more you add to ambermini the more of a time sink it becomes to maintain (by the way, AmberTools 16 was released on April 30th).
Great! What needs to be done to update ambermini
to keep it in sync?
If reduce is already available in a conda channel, I would say either copy it from there or just add that channel to your conda environment. Excising it into ambermini will be a PITA.
OK.
from ambermini.
Great! What needs to be done to update ambermini to keep it in sync?
Not sure. There was a massive reorganization of force fields that happened after I started my new job, and corresponding changes to tleap. The general goal of the FF work was to separate the protein and nucleic acid force fields into separate leaprc files, and files like leaprc.ff14SB were shuffled off into oldff
.
I guess what needs to be done is to migrate the changes between AmberTools 15 and AmberTools 16 into ambermini (preferably without getting rid of the fixes for Windows and not having to set AMBERHOME
). But that work was a large undertaking and was probably the main reason the release was delayed longer than expected.
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I'll migrate the update discussion to another thread.
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Related Issues (20)
- Update for AmberTools 15? HOT 14
- Ran into issue with binstar build HOT 2
- Conda package tests fails despite succeeding
- Conda recipe tests fails despite succeeding HOT 2
- 'sqm -h' fails HOT 3
- ambermini conda package still failing HOT 3
- Issues with osx ambermini package HOT 14
- Set up appveyor HOT 5
- pdb4amber? HOT 3
- bondtype and atomtype executables complain AMBERHOME is not set HOT 7
- Windows uses? HOT 15
- sqm regression from AmberTools14 to 15? HOT 6
- Update to AmberTools 16 HOT 47
- How to handle AmberMini Development going forward HOT 11
- AmberTools17 update HOT 5
- OPC water and 12_6_4 parameters
- Incorrectly translated equation in gaff
- Compiling problems of arpack with gfortran-10
- How to change sqm.out directory when using antechamber to convert pdb to mol2? HOT 2
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