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2019-multi-target-feature-selection

Matlab code for the methods presented in the paper "Multi-target feature selection through output space clustering"

abcd-hcp-pipeline

bids application for processing functional MRI data, robust to scanner, acquisition and age variability.

awesome-ai-ml-dl

Awesome Artificial Intelligence, Machine Learning and Deep Learning as we learn it. Study notes and a curated list of awesome resources of such topics.

ciftify

The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets

combatharmonization

Harmonization of multi-site imaging data with ComBat

drawnemenyi

Publication quality figure for Nemenyi post-hoc test for the Friedman's test

fieldtrip

The MATLAB toolbox for MEG and EEG analysis

fmriprep

fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.

hcp-utils

Utilities to use HCP and HCP-like data with nilearn and other Python tools

hcppipelines

intersubj_rsa

An exploration of how to use inter-subject representational similarity analysis (is-RSA) to study individual differences in brain activity during naturalistic neuroimaging.

ml-videos

A collection of video resources for machine learning

mrtrix_analysis_scripts

Scripts for analyzing diffusion data with MRtrix

retina_oct_dcm2nii

This repository converts retinal OCT data from dicom format to nifti, and adjusts the orientations.

scanningthehorizon

Code and data for "Scanning the Horizon..." review in Nature Reviews Neuroscience

synthseg

Contrast-agnostic segmentation of MRI scans

tf2.4_ivim-mri_codecollection

OSIPI TF2.4: IVIM MRI code collection