Comments (4)
The current --merge-list implementation scans the file twice, so an input stream like "<(echo 58C_02)" won't work.
There are too many situations where it's useful to make 2 (or occasionally more) passes over the input data to justify supporting input streams everywhere. The best I can do is document which flags support input streams and which flags don't, once the implementation is finalized.
from plink-ng.
In the latest stable build (v1.90b6.24, 6 June 2021), --merge-list still segfaults when given an input stream rather than a file. As @chrchang says, it's fine to not support input streams for some operations, but you can't just segfault when you get one!
from plink-ng.
Fair enough. This should be fixed in today's dev build (and will be fixed in the next stable build).
from plink-ng.
Awesome, thanks!
from plink-ng.
Related Issues (20)
- CentOs7.9 install plink1.9 error HOT 3
- how to install in arm64 ? thks HOT 4
- Request: plink2 --extract/exclude-if-info [key(s)...] HOT 1
- Compilation failure HOT 1
- Can't run anny PLINK command on Ubuntu 22.04 HOT 1
- File read error when converting .vcf to PLINK .ped and .map file HOT 1
- Request for pgen files to include a version number in the header HOT 8
- can plink handle vcf files with * notation? HOT 1
- Pgenlib 0.90.1 is not installable from PyPI with Python 3.12.2 on Mac aarch64 HOT 1
- Logistic regression returns NAs output---FIRTH_CONVERGE_FAIL HOT 1
- plink2 --update-name issue HOT 1
- Obtaining different results from the same data in different formats HOT 2
- PLINK v1.9 `sprintf()` compilation warnings: Does a way to silence/fix them exist? HOT 3
- Persistent download URLs for built binaries? HOT 2
- pgenlibr: ReadList question HOT 7
- Problem with combining different samples into a single plink 1 file for later input HOT 1
- --homozyg-group question HOT 1
- clumping
- Error: Duplicate phenotype/covariate ID HOT 1
- PLINK 1.9: Issues with --make-bed and empty .fam file HOT 1
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from plink-ng.