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Deep learning framework for proteomics
Python Package for the downstream analysis of mass-spectrometry-based proteomics data
R for Mass Spectrometry documentation
Creating and using (chemical) compound databases
An modular and extensible app for visualization of mass spectrometry data and optimization of data acquisition.
Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.
Moon charts, a pie chart alternative, for ggplot2
Enhancing {ggplot2} plots with statistical analysis ๐๐ฃ
An LC-MS/MS glycan and glycopeptide search engine
Top down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data
An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics
R package for MetaboAnalyst
๐งช ๐ฅ Transparent exploration of machine learning for biomarker discovery from proteomics and omics data
**WORK IN PROGRESS** misc. functions for DIA proteomics data analysis and parsing to MSnSet objects
Tools for Batch Effects Diagnostics and Correction
This is a collection of minimal code to visualize various aspects of proteomics data.
pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.
Python Data Science Handbook: full text in Jupyter Notebooks
Merge Qualitative and Quantitative Metabolomics Data exported from Progenesis QI software
Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.
Low level infrastructure to handle MS spectra
The TMTProC module is the group of Matlab scripts associated with our paper "TMTPro Complementary Ion Quantification Increases Plexing and Sensitivity for Accurate Multiplexed Proteomics at the MS2 Level".
The Venn Diagram Plotter draws correctly proportioned and positioned two and three circle Venn diagrams (aka Euler diagrams) whose colors can be customized and the diagrams copied to the clipboard or saved to disk.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
๐ Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. ๐๐๐
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google โค๏ธ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.